Package picard.util
Class SequenceDictionaryUtils.SamSequenceRecordsIterator
- java.lang.Object
-
- picard.util.SequenceDictionaryUtils.SamSequenceRecordsIterator
-
- All Implemented Interfaces:
Iterator<htsjdk.samtools.SAMSequenceRecord>
- Enclosing class:
- SequenceDictionaryUtils
public static class SequenceDictionaryUtils.SamSequenceRecordsIterator extends Object implements Iterator<htsjdk.samtools.SAMSequenceRecord>
-
-
Constructor Summary
Constructors Constructor Description SamSequenceRecordsIterator(File referenceSequence, boolean truncateNamesAtWhitespace)
-
Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
hasNext()
htsjdk.samtools.SAMSequenceRecord
next()
void
setGenomeAssembly(String genomeAssembly)
void
setSpecies(String species)
void
setUri(String uri)
-
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
-
Methods inherited from interface java.util.Iterator
forEachRemaining, remove
-
-
-
-
Constructor Detail
-
SamSequenceRecordsIterator
public SamSequenceRecordsIterator(File referenceSequence, boolean truncateNamesAtWhitespace)
-
-