bmtk
bmtk.analyzer
bmtk.analyzer.cell_vars
bmtk.analyzer.compartment
bmtk.analyzer.ecp
bmtk.analyzer.firing_rates
bmtk.analyzer.io_tools
bmtk.analyzer.spike_trains
bmtk.analyzer.spikes_analyzer
bmtk.analyzer.spikes_loader
bmtk.analyzer.utils
bmtk.builder
bmtk.builder.auxi
bmtk.builder.auxi.edge_connectors
bmtk.builder.auxi.node_params
bmtk.builder.bionet
bmtk.builder.bionet.swc_reader
bmtk.builder.builder_utils
bmtk.builder.connection_map
bmtk.builder.connector
bmtk.builder.edge
bmtk.builder.edges_sorter
bmtk.builder.edges_sorter.memory_sorter
bmtk.builder.edges_sorter.merge_sorter
bmtk.builder.functor_cache
bmtk.builder.id_generator
bmtk.builder.index_builders
bmtk.builder.iterator
bmtk.builder.network_adaptors
bmtk.builder.network_adaptors.dm_network
bmtk.builder.network_adaptors.dm_network_orig
bmtk.builder.network_adaptors.edge_props_table
bmtk.builder.network_adaptors.edges_collator
bmtk.builder.network_adaptors.network
bmtk.builder.network_adaptors.nxnetwork
bmtk.builder.network_builder
bmtk.builder.networks
bmtk.builder.node
bmtk.builder.node_pool
bmtk.builder.node_set
bmtk.simulator
bmtk.simulator.bionet
bmtk.simulator.bionet.biocell
bmtk.simulator.bionet.bionetwork
bmtk.simulator.bionet.biosimulator
bmtk.simulator.bionet.cell
bmtk.simulator.bionet.config
bmtk.simulator.bionet.default_setters
bmtk.simulator.bionet.default_setters.cell_models
bmtk.simulator.bionet.default_setters.synapse_models
bmtk.simulator.bionet.default_setters.synaptic_weights
bmtk.simulator.bionet.gids
bmtk.simulator.bionet.iclamp
bmtk.simulator.bionet.io_tools
bmtk.simulator.bionet.modules
bmtk.simulator.bionet.modules.ecp
bmtk.simulator.bionet.modules.record_cellvars
bmtk.simulator.bionet.modules.record_clamp
bmtk.simulator.bionet.modules.record_netcons
bmtk.simulator.bionet.modules.record_spikes
bmtk.simulator.bionet.modules.save_synapses
bmtk.simulator.bionet.modules.sim_module
bmtk.simulator.bionet.modules.xstim
bmtk.simulator.bionet.modules.xstim_waveforms
bmtk.simulator.bionet.morphology
bmtk.simulator.bionet.nml_reader
bmtk.simulator.bionet.nrn
bmtk.simulator.bionet.pointprocesscell
bmtk.simulator.bionet.pointsomacell
bmtk.simulator.bionet.pyfunction_cache
bmtk.simulator.bionet.seclamp
bmtk.simulator.bionet.sonata_adaptors
bmtk.simulator.bionet.utils
bmtk.simulator.bionet.virtualcell
bmtk.simulator.core
bmtk.simulator.core.edge_population
bmtk.simulator.core.graph
bmtk.simulator.core.io_tools
bmtk.simulator.core.network_reader
bmtk.simulator.core.node_population
bmtk.simulator.core.node_sets
bmtk.simulator.core.pyfunction_cache
bmtk.simulator.core.simulation_config
bmtk.simulator.core.simulation_config_validator
bmtk.simulator.core.simulator
bmtk.simulator.core.simulator_network
bmtk.simulator.core.sonata_reader
bmtk.simulator.core.sonata_reader.edge_adaptor
bmtk.simulator.core.sonata_reader.network_reader
bmtk.simulator.core.sonata_reader.node_adaptor
bmtk.simulator.filternet
bmtk.simulator.filternet.cell
bmtk.simulator.filternet.cell_models
bmtk.simulator.filternet.config
bmtk.simulator.filternet.default_setters
bmtk.simulator.filternet.default_setters.cell_loaders
bmtk.simulator.filternet.filternetwork
bmtk.simulator.filternet.filters
bmtk.simulator.filternet.filtersimulator
bmtk.simulator.filternet.io_tools
bmtk.simulator.filternet.lgnmodel
bmtk.simulator.filternet.lgnmodel.cellmetrics
bmtk.simulator.filternet.lgnmodel.cellmodel
bmtk.simulator.filternet.lgnmodel.cursor
bmtk.simulator.filternet.lgnmodel.fitfuns
bmtk.simulator.filternet.lgnmodel.kernel
bmtk.simulator.filternet.lgnmodel.lattice_unit_constructor
bmtk.simulator.filternet.lgnmodel.lgnmodel1
bmtk.simulator.filternet.lgnmodel.linearfilter
bmtk.simulator.filternet.lgnmodel.lnunit
bmtk.simulator.filternet.lgnmodel.make_cell_list
bmtk.simulator.filternet.lgnmodel.movie
bmtk.simulator.filternet.lgnmodel.poissongeneration
bmtk.simulator.filternet.lgnmodel.singleunitcell
bmtk.simulator.filternet.lgnmodel.spatialfilter
bmtk.simulator.filternet.lgnmodel.temporalfilter
bmtk.simulator.filternet.lgnmodel.transferfunction
bmtk.simulator.filternet.lgnmodel.util_fns
bmtk.simulator.filternet.lgnmodel.utilities
bmtk.simulator.filternet.modules
bmtk.simulator.filternet.modules.base
bmtk.simulator.filternet.modules.create_spikes
bmtk.simulator.filternet.modules.record_rates
bmtk.simulator.filternet.pyfunction_cache
bmtk.simulator.filternet.sonata_adaptors
bmtk.simulator.filternet.transfer_functions
bmtk.simulator.filternet.utils
bmtk.simulator.pointnet.config
bmtk.simulator.pointnet.default_setters
bmtk.simulator.pointnet.default_setters.synapse_models
bmtk.simulator.pointnet.default_setters.synaptic_weights
bmtk.simulator.pointnet.io_tools
bmtk.simulator.pointnet.pyfunction_cache
bmtk.simulator.popnet.sonata_adaptors
bmtk.simulator.popnet.utils
bmtk.simulator.utils
bmtk.simulator.utils.simulation_inputs
bmtk.simulator.utils.simulation_reports
bmtk.tests
bmtk.tests.simulator
bmtk.tests.simulator.bionet
bmtk.tests.simulator.bionet.bionet_virtual_files
bmtk.tests.simulator.bionet.conftest
bmtk.tests.simulator.bionet.set_cell_params
bmtk.tests.simulator.bionet.set_syn_params
bmtk.tests.simulator.bionet.set_weights
bmtk.tests.simulator.bionet.test_biograph
bmtk.tests.simulator.bionet.test_gids
bmtk.tests.simulator.bionet.test_nrn
bmtk.tests.simulator.bionet.test_virtualcell
bmtk.tests.simulator.pointnet
bmtk.tests.simulator.pointnet.pointnet_virtual_files
bmtk.tests.simulator.popnet
bmtk.tests.simulator.popnet.popnet_virtual_files
bmtk.tests.simulator.popnet.test_popgraph
bmtk.utils
bmtk.utils.hdf5_helper
bmtk.utils.io
bmtk.utils.io.cell_vars
bmtk.utils.io.firing_rates
bmtk.utils.io.ioutils
bmtk.utils.io.spike_trains
bmtk.utils.reports
bmtk.utils.reports.compartment
bmtk.utils.reports.compartment.compartment_reader
bmtk.utils.reports.compartment.compartment_report
bmtk.utils.reports.compartment.compartment_writer
bmtk.utils.reports.compartment.core
bmtk.utils.reports.compartment.plotting
bmtk.utils.reports.current_writer
bmtk.utils.reports.spike_trains
bmtk.utils.reports.spike_trains.core
bmtk.utils.reports.spike_trains.plotting
bmtk.utils.reports.spike_trains.spike_train_buffer
bmtk.utils.reports.spike_trains.spike_train_readers
bmtk.utils.reports.spike_trains.spike_trains
bmtk.utils.reports.spike_trains.spike_trains_api
bmtk.utils.reports.spike_trains.spikes_file_writers
bmtk.utils.reports.spike_trains.stats
bmtk.utils.sim_setup
bmtk.utils.sonata
bmtk.utils.sonata.column_property
bmtk.utils.sonata.config
bmtk.utils.sonata.config.sonata_config
bmtk.utils.sonata.edge
bmtk.utils.sonata.file
bmtk.utils.sonata.file_root
bmtk.utils.sonata.group
bmtk.utils.sonata.node
bmtk.utils.sonata.population
bmtk.utils.sonata.types_table
bmtk.utils.sonata.utils