Uses of Class
org.biojava.nbio.structure.quaternary.BioAssemblyInfo
-
Packages that use BioAssemblyInfo Package Description org.biojava.nbio.structure org.biojava.nbio.structure.io Input and Output of Structuresorg.biojava.nbio.structure.io.mmtf -
-
Uses of BioAssemblyInfo in org.biojava.nbio.structure
Methods in org.biojava.nbio.structure that return types with arguments of type BioAssemblyInfo Modifier and Type Method Description java.util.Map<java.lang.Integer,BioAssemblyInfo>
PDBHeader. getBioAssemblies()
Return the map of biological assemblies.Method parameters in org.biojava.nbio.structure with type arguments of type BioAssemblyInfo Modifier and Type Method Description void
PDBHeader. setBioAssemblies(java.util.Map<java.lang.Integer,BioAssemblyInfo> bioAssemblies)
-
Uses of BioAssemblyInfo in org.biojava.nbio.structure.io
Methods in org.biojava.nbio.structure.io that return types with arguments of type BioAssemblyInfo Modifier and Type Method Description java.util.Map<java.lang.Integer,BioAssemblyInfo>
PDBBioAssemblyParser. getTransformationMap()
Returns a map of bioassembly transformations -
Uses of BioAssemblyInfo in org.biojava.nbio.structure.io.mmtf
Methods in org.biojava.nbio.structure.io.mmtf with parameters of type BioAssemblyInfo Modifier and Type Method Description static java.util.Map<double[],int[]>
MmtfUtils. getTransformMap(BioAssemblyInfo bioassemblyInfo, java.util.Map<java.lang.String,java.lang.Integer> chainIdToIndexMap)
Convert a bioassembly information into a map of transform, chainindices it relates to.
-