Class TestCasesFileIndexChrPos


  • public class TestCasesFileIndexChrPos
    extends TestCasesBase
    Test cases for file index (chr:pos index on files)
    Author:
    pcingola
    • Constructor Detail

      • TestCasesFileIndexChrPos

        public TestCasesFileIndexChrPos()
    • Method Detail

      • test_00_long_file

        @Test
        public void test_00_long_file()
        Test getting random lines from a file
      • test_00_short_file

        @Test
        public void test_00_short_file()
        Test getting random lines from a file
      • test_01

        @Test
        public void test_01()
                     throws java.io.IOException
        Test : Find beginning of a chromosome
        Throws:
        java.io.IOException
      • test_02

        @Test
        public void test_02()
                     throws java.io.IOException
        Test : Find a line
        Throws:
        java.io.IOException
      • test_03

        @Test
        public void test_03()
                     throws java.io.IOException
        Test : Find a chr:pos
        Throws:
        java.io.IOException
      • test_04

        @Test
        public void test_04()
                     throws java.io.IOException
        Test : Find a chr:pos
        Throws:
        java.io.IOException
      • test_05

        @Test
        public void test_05()
                     throws java.io.IOException
        Test : Find a chr:pos that does not exists
        Throws:
        java.io.IOException
      • test_06

        @Test
        public void test_06()
        Test : Find a chr:pos that does not exists
      • test_07

        @Test
        public void test_07()
        Test : Find a chr:pos that does not exists
      • test_10

        @Test
        public void test_10()
      • test_11

        @Test
        public void test_11()
        Test : Find a chr:pos that does not exists
      • test_20

        @Test
        public void test_20()
        Test : Find a chr:pos that does not exists
      • test_21

        @Test
        public void test_21()
        Test : Find a chr:pos that does not exists
      • test_22

        @Test
        public void test_22()
        Test : Find a chr:pos that does not exists
      • test_23

        @Test
        public void test_23()
        Test : Dump small portions of a file
      • test_24

        @Test
        public void test_24()
        Test : Dump large portions of a file