Class TestCasesIntervalTreeArray
- java.lang.Object
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- org.snpeff.snpEffect.testCases.unity.TestCasesIntervalTree
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- org.snpeff.snpEffect.testCases.unity.TestCasesIntervalTreeArray
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public class TestCasesIntervalTreeArray extends TestCasesIntervalTree
Test case for interval tree structure
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Field Summary
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Fields inherited from class org.snpeff.snpEffect.testCases.unity.TestCasesIntervalTree
CHR_SIZE, chromosome, debug, genome, markers, MAX_SMALL_MARKER_SIZE, NUM_LARGE_INTERVALS, NUM_SMALL_INTERVALS, rand, verbose
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Constructor Summary
Constructors Constructor Description TestCasesIntervalTreeArray()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description protected Itree
newItree(Markers markers)
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Methods inherited from class org.snpeff.snpEffect.testCases.unity.TestCasesIntervalTree
before, compareQuery, createRandomLargeMarkers, createRandomMarkers, createRandomSmallMarkers, queryNaive, test_01, test_02
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Method Detail
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newItree
protected Itree newItree(Markers markers)
- Overrides:
newItree
in classTestCasesIntervalTree
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