Package org.snpeff.genBank
Class FeaturesFile
- java.lang.Object
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- org.snpeff.genBank.FeaturesFile
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- Direct Known Subclasses:
EmblFile
,GenBankFile
public abstract class FeaturesFile extends java.lang.Object implements java.lang.Iterable<Features>, java.util.Iterator<Features>
A file containing one or more set of features (e.g. multiple chromosomes concatenated in a single file) Reference: http://www.insdc.org/documents/feature-table- Author:
- pcingola
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Constructor Summary
Constructors Constructor Description FeaturesFile(java.lang.String fileName)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
hasNext()
java.util.Iterator<Features>
iterator()
Features
next()
protected void
open(java.lang.String fileName)
Open a filevoid
remove()
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Method Detail
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hasNext
public boolean hasNext()
- Specified by:
hasNext
in interfacejava.util.Iterator<Features>
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iterator
public java.util.Iterator<Features> iterator()
- Specified by:
iterator
in interfacejava.lang.Iterable<Features>
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open
protected void open(java.lang.String fileName)
Open a file
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remove
public void remove()
- Specified by:
remove
in interfacejava.util.Iterator<Features>
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