Class IdMapperEntry

  • All Implemented Interfaces:
    java.lang.Cloneable, java.lang.Comparable<IdMapperEntry>

    public class IdMapperEntry
    extends java.lang.Object
    implements java.lang.Cloneable, java.lang.Comparable<IdMapperEntry>
    An entry in a ID mapping file
    Author:
    pcingola
    • Constructor Summary

      Constructors 
      Constructor Description
      IdMapperEntry​(java.lang.String pdbId, java.lang.String trId)  
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      IdMapperEntry cloneAndSet​(java.lang.String chainId, int pdbAaLen, int trAaLen)
      Clone the object and return a copy having a different chain ID
      int compareTo​(IdMapperEntry o)  
      java.lang.String toString()  
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
    • Field Detail

      • trId

        public java.lang.String trId
      • pdbId

        public java.lang.String pdbId
      • pdbChainId

        public java.lang.String pdbChainId
      • pdbAaLen

        public int pdbAaLen
      • trAaLen

        public int trAaLen
    • Constructor Detail

      • IdMapperEntry

        public IdMapperEntry​(java.lang.String pdbId,
                             java.lang.String trId)
    • Method Detail

      • cloneAndSet

        public IdMapperEntry cloneAndSet​(java.lang.String chainId,
                                         int pdbAaLen,
                                         int trAaLen)
        Clone the object and return a copy having a different chain ID
      • compareTo

        public int compareTo​(IdMapperEntry o)
        Specified by:
        compareTo in interface java.lang.Comparable<IdMapperEntry>
      • toString

        public java.lang.String toString()
        Overrides:
        toString in class java.lang.Object