Class TestCasesApplyMixed


  • public class TestCasesApplyMixed
    extends TestCasesBaseApply
    Test cases: apply a variant (MIXED) to a transcript
    • Constructor Detail

      • TestCasesApplyMixed

        public TestCasesApplyMixed()
    • Method Detail

      • test_apply_variant_01_longer

        @Test
        public void test_apply_variant_01_longer()
        Variant before exon
      • test_apply_variant_01_shorter

        @Test
        public void test_apply_variant_01_shorter()
        Variant before exon
      • test_apply_variant_02_longer

        @Test
        public void test_apply_variant_02_longer()
        Variant before exon
      • test_apply_variant_02_shorter

        @Test
        public void test_apply_variant_02_shorter()
        Variant before exon
      • test_apply_variant_03_longer

        @Test
        public void test_apply_variant_03_longer()
        Variant overlapping exon start
      • test_apply_variant_03_shorter

        @Test
        public void test_apply_variant_03_shorter()
        Variant overlapping exon start
      • test_apply_variant_04_longer

        @Test
        public void test_apply_variant_04_longer()
        Variant at exon start
      • test_apply_variant_04_shorter

        @Test
        public void test_apply_variant_04_shorter()
        Variant at exon start
      • test_apply_variant_05_longer

        @Test
        public void test_apply_variant_05_longer()
        Variant in exon
      • test_apply_variant_05_shorter

        @Test
        public void test_apply_variant_05_shorter()
        Variant in exon
      • test_apply_variant_06_longer

        @Test
        public void test_apply_variant_06_longer()
        Variant in exon
      • test_apply_variant_06_shorter

        @Test
        public void test_apply_variant_06_shorter()
        Variant in exon
      • test_apply_variant_07_longer

        @Test
        public void test_apply_variant_07_longer()
        Variant overlapping exon end
      • test_apply_variant_07_shorter

        @Test
        public void test_apply_variant_07_shorter()
        Variant overlapping exon end
      • test_apply_variant_08_longer

        @Test
        public void test_apply_variant_08_longer()
        Variant right after exon end
      • test_apply_variant_08_shorter

        @Test
        public void test_apply_variant_08_shorter()
        Variant right after exon end
      • test_apply_variant_09_longer

        @Test
        public void test_apply_variant_09_longer()
        Variant after exon end
      • test_apply_variant_09_shorter

        @Test
        public void test_apply_variant_09_shorter()
        Variant after exon end