Uses of Class
org.snpeff.motif.Pwm
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Packages that use Pwm Package Description org.snpeff.interval org.snpeff.motif -
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Uses of Pwm in org.snpeff.interval
Methods in org.snpeff.interval that return Pwm Modifier and Type Method Description Pwm
Motif. getPwm()
Methods in org.snpeff.interval with parameters of type Pwm Modifier and Type Method Description void
Motif. setPwm(Pwm pwm)
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Uses of Pwm in org.snpeff.motif
Subclasses of Pwm in org.snpeff.motif Modifier and Type Class Description class
PwmAndSeqs
Create a DNA motif count matrix and also count the number of sequences in that contribute to this motif.Methods in org.snpeff.motif that return Pwm Modifier and Type Method Description Pwm
Jaspar. getPwm(java.lang.String pwmId)
Methods in org.snpeff.motif that return types with arguments of type Pwm Modifier and Type Method Description java.util.Iterator<Pwm>
Jaspar. iterator()
Constructors in org.snpeff.motif with parameters of type Pwm Constructor Description MotifLogo(Pwm pwm)
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