Class MasterEff
- java.lang.Object
-
- org.snpeff.akka.ConcurrentActor
-
- org.snpeff.akka.Master<VcfEntry,T>
-
- org.snpeff.akka.vcf.MasterVcf<java.lang.String>
-
- org.snpeff.snpEffect.commandLine.eff.MasterEff
-
-
Field Summary
-
Fields inherited from class org.snpeff.akka.vcf.MasterVcf
addHeader, parseNow, showHeader, vcfFileIterator
-
Fields inherited from class org.snpeff.akka.Master
batchSize, completion, countInputObjects, debug, DEFAULT_BATCH_SIZE, DEFAULT_SHOW_EVERY, LOAD_FACTOR, nextOutput, numWorkers, pool, props, sentWorks, showEvery, worksBySerial
-
-
Constructor Summary
Constructors Constructor Description MasterEff(int numWorkers, SnpEffCmdEff snpEffCmdEff, SnpEffectPredictor snpEffectPredictor, OutputFormatter outputFormatter, IntervalForest filterIntervals)
-
Method Summary
-
Methods inherited from class org.snpeff.akka.vcf.MasterVcf
hasNext, next, setAddHeader, setShowHeader, startMaster
-
Methods inherited from class org.snpeff.akka.Master
get, iterableWork, iterator, output, output, processResults, remove
-
-
-
-
Constructor Detail
-
MasterEff
public MasterEff(int numWorkers, SnpEffCmdEff snpEffCmdEff, SnpEffectPredictor snpEffectPredictor, OutputFormatter outputFormatter, IntervalForest filterIntervals)
-
-