Class TranslocationReport


  • public class TranslocationReport
    extends java.lang.Object
    Pojo for translocation reports
    Author:
    pcingola
    • Method Detail

      • getChr1

        public java.lang.String getChr1()
      • getChr2

        public java.lang.String getChr2()
      • getGeneName1

        public java.lang.String getGeneName1()
      • getGeneName2

        public java.lang.String getGeneName2()
      • getHgvsC

        public java.lang.String getHgvsC()
      • getHgvsP

        public java.lang.String getHgvsP()
      • getImpact

        public java.lang.String getImpact()
      • getIndex

        public java.lang.String getIndex()
      • getPos1OneBased

        public int getPos1OneBased()
        Get position (as one-based coordinates)
      • getPos2OneBased

        public int getPos2OneBased()
        Get position (as one-based coordinates)
      • getSvgPlot

        public java.lang.String getSvgPlot()
      • getTrId1

        public java.lang.String getTrId1()
      • getTrId2

        public java.lang.String getTrId2()
      • getVariantEffect

        public java.lang.String getVariantEffect()
      • getVcfEffect

        public java.lang.String getVcfEffect()
      • setSvgPlot

        public void setSvgPlot​(java.lang.String svgPlot)