Class TestCasesApplyDel


  • public class TestCasesApplyDel
    extends TestCasesBaseApply
    Test cases: apply a variant (DEL) to a transcript
    • Constructor Detail

      • TestCasesApplyDel

        public TestCasesApplyDel()
    • Method Detail

      • test_apply_variant_01

        public void test_apply_variant_01()
        Variant before exon
      • test_apply_variant_02

        public void test_apply_variant_02()
        Variant right before exon start
      • test_apply_variant_03

        public void test_apply_variant_03()
        Variant overlapping exon start
      • test_apply_variant_04

        public void test_apply_variant_04()
        Variant at exon start
      • test_apply_variant_05

        public void test_apply_variant_05()
        Variant in exon
      • test_apply_variant_06

        public void test_apply_variant_06()
        Variant right before exon end
      • test_apply_variant_07

        public void test_apply_variant_07()
        Variant overlapping exon end
      • test_apply_variant_08

        public void test_apply_variant_08()
        Variant right after exon end
      • test_apply_variant_09

        public void test_apply_variant_09()
        Variant after exon end
      • test_apply_variant_10

        public void test_apply_variant_10()
        Variant over exon: variant is larger than exon, starts before exon and overlaps the whole exon
      • test_apply_variant_11

        public void test_apply_variant_11()
        Variant over exon: variant is larger than exon and starts right at exons start and ends after exon end
      • test_apply_variant_12

        public void test_apply_variant_12()
        Variant over exon: variant is larger than exon, starts before exon start and end right at exon end
      • test_apply_variant_13

        public void test_apply_variant_13()
        Variant over exon: variant is on the same coordiantes as exon