Package org.snpeff.vcf
Class VcfHeaderFormat
- java.lang.Object
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- org.snpeff.vcf.VcfHeaderEntry
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- org.snpeff.vcf.VcfHeaderInfo
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- org.snpeff.vcf.VcfHeaderFormat
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public class VcfHeaderFormat extends VcfHeaderInfo
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Nested Class Summary
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Nested classes/interfaces inherited from class org.snpeff.vcf.VcfHeaderInfo
VcfHeaderInfo.VcfInfoNumber
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Field Summary
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Fields inherited from class org.snpeff.vcf.VcfHeaderInfo
description, implicit, number, vcfInfoNumber, vcfInfoType
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Fields inherited from class org.snpeff.vcf.VcfHeaderEntry
id, line
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Constructor Summary
Constructors Constructor Description VcfHeaderFormat(java.lang.String line)
Constructor using a "##FORMAT" line from a VCF fileVcfHeaderFormat(java.lang.String id, VcfInfoType vcfInfoType, java.lang.String number, java.lang.String description)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description boolean
isFormat()
java.lang.String
toString()
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Methods inherited from class org.snpeff.vcf.VcfHeaderInfo
getDescription, getNumber, getVcfInfoNumber, getVcfInfoType, isImplicit, isInfo, isNumberAllAlleles, isNumberNumber, isNumberOnePerAllele, isNumberOnePerGenotype, isNumberPerAllele, setImplicit, setNumber, setNumber, setVcfInfoNumber, setVcfInfoType
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Methods inherited from class org.snpeff.vcf.VcfHeaderEntry
factory, getId, setId
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Constructor Detail
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VcfHeaderFormat
public VcfHeaderFormat(java.lang.String line)
Constructor using a "##FORMAT" line from a VCF file
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VcfHeaderFormat
public VcfHeaderFormat(java.lang.String id, VcfInfoType vcfInfoType, java.lang.String number, java.lang.String description)
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Method Detail
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isFormat
public boolean isFormat()
- Overrides:
isFormat
in classVcfHeaderEntry
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toString
public java.lang.String toString()
- Overrides:
toString
in classVcfHeaderInfo
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