Raptor 3.0.0
A fast and space-efficient pre-filter for querying very large collections of nucleotide sequences
index.hpp File Reference

Provides raptor::raptor_index. More...

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Classes

class  raptor::raptor_index< data_t >
 

Typedefs

using raptor::index_structure::hibf = hierarchical_interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using raptor::index_structure::hibf_compressed = hierarchical_interleaved_bloom_filter< seqan3::data_layout::compressed >
 
using raptor::index_structure::ibf = seqan3::interleaved_bloom_filter< seqan3::data_layout::uncompressed >
 
using raptor::index_structure::ibf_compressed = seqan3::interleaved_bloom_filter< seqan3::data_layout::compressed >
 

Detailed Description

Provides raptor::raptor_index.

Author
Enrico Seiler <enrico.seiler AT fu-berlin.de>