Package picard.sam.markduplicates
Enum CheckDuplicateMarking.Mode
- java.lang.Object
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- java.lang.Enum<CheckDuplicateMarking.Mode>
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- picard.sam.markduplicates.CheckDuplicateMarking.Mode
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- All Implemented Interfaces:
Serializable
,Comparable<CheckDuplicateMarking.Mode>
,org.broadinstitute.barclay.argparser.CommandLineParser.ClpEnum
- Enclosing class:
- CheckDuplicateMarking
public static enum CheckDuplicateMarking.Mode extends Enum<CheckDuplicateMarking.Mode> implements org.broadinstitute.barclay.argparser.CommandLineParser.ClpEnum
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Enum Constant Summary
Enum Constants Enum Constant Description ALL
PRIMARY_MAPPED_ONLY
PRIMARY_ONLY
PRIMARY_PROPER_PAIR_ONLY
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Method Summary
All Methods Static Methods Instance Methods Concrete Methods Modifier and Type Method Description String
getHelpDoc()
static CheckDuplicateMarking.Mode
valueOf(String name)
Returns the enum constant of this type with the specified name.static CheckDuplicateMarking.Mode[]
values()
Returns an array containing the constants of this enum type, in the order they are declared.
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Enum Constant Detail
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ALL
public static final CheckDuplicateMarking.Mode ALL
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PRIMARY_ONLY
public static final CheckDuplicateMarking.Mode PRIMARY_ONLY
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PRIMARY_MAPPED_ONLY
public static final CheckDuplicateMarking.Mode PRIMARY_MAPPED_ONLY
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PRIMARY_PROPER_PAIR_ONLY
public static final CheckDuplicateMarking.Mode PRIMARY_PROPER_PAIR_ONLY
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Method Detail
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values
public static CheckDuplicateMarking.Mode[] values()
Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:for (CheckDuplicateMarking.Mode c : CheckDuplicateMarking.Mode.values()) System.out.println(c);
- Returns:
- an array containing the constants of this enum type, in the order they are declared
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valueOf
public static CheckDuplicateMarking.Mode valueOf(String name)
Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)- Parameters:
name
- the name of the enum constant to be returned.- Returns:
- the enum constant with the specified name
- Throws:
IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is null
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getHelpDoc
public String getHelpDoc()
- Specified by:
getHelpDoc
in interfaceorg.broadinstitute.barclay.argparser.CommandLineParser.ClpEnum
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